Details for Phenotype: Seed width mid height (ID: 68)

Phenotype ID:
68
Name:
Seed width mid height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Width measured at 1/2 of the seed's length
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10802.7146375United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10842.8588375United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10852.7993United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10862.575725United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10892.5492625United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10902.8284United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10912.60615United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10922.648475United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10932.6723United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10942.7754875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10952.4262375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10962.2926125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10972.6842United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10982.5294375United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11012.9157125United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11033.2120375United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11042.5413125United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11052.16165United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11063.124725United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11072.4751875United StatesUtah40.1781-111.65071
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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