Details for Phenotype: Seed area (ID: 67)

Phenotype ID:
67
Name:
Seed area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm2
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Area of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_59ANN13857.487475United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13867.6448625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13876.0171125United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13886.8661625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13897.3132375United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13907.6801United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN139110.086525United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13927.0599625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13939.4333375United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13947.619875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13957.1383625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13969.161925United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13977.3024375United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13988.905775United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN139910.1255875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN14008.7591875United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN14016.9155875United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14028.4977375United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN140310.766825United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14049.844525United StatesTexas27.77652-97.66801
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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