Details for Phenotype: Seed area (ID: 67)

Phenotype ID:
67
Name:
Seed area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm2
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Area of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_57ANN136510.618975United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN136610.8473875United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13678.4181United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN136810.129175United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13697.8478625United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13709.55025United StatesTexas27.63854-97.24526
Helianthus annuusANN_58ANN13717.591925United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13727.97405United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13738.1476125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN137410.06785United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN137510.1568625United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13767.7074125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN137710.9993125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13789.0017625United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13798.8372875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13809.1788375United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN13816.687475United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13826.3953United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN138310.415725United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13847.508175United StatesTexas26.50251-97.77181
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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