Details for Phenotype: Seed area (ID: 67)

Phenotype ID:
67
Name:
Seed area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm2
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Area of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_55ANN13419.6343875United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13427.7941125United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13438.18705United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13447.4334375United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN134510.3825United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13467.5810625United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13478.694125United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13487.12265United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13507.2337375United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN13519.8701United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13528.3843United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN135310.3755United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN135413.0703625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN135510.527025United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13567.5966375United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13599.12165United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13609.3069625United StatesTexas28.08852-97.06011
Helianthus annuusANN_57ANN13616.9821625United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN136312.3914125United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN136411.301775United StatesTexas27.63854-97.24526
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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