Details for Phenotype: Seed area (ID: 67)

Phenotype ID:
67
Name:
Seed area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm2
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Area of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN132010.66535United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN13218.86652United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN132211.43455United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13237.869875United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN132410.3417United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN132510.5348United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13269.8738625United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN132710.6134125United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13289.17845United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13299.126925United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13308.9694875United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN13316.589875United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13328.0098625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13338.10625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13348.16945United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13359.1676375United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN133612.1343125United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13387.835725United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13398.373975United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13407.4771125United StatesTexas29.11355-97.39837
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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