Details for Phenotype: Seed area (ID: 67)

Phenotype ID:
67
Name:
Seed area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm2
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Area of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_31ANN110913.0892625United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN111011.5815875United StatesUtah40.1781-111.65071
Helianthus annuusANN_32ANN11159.579275United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN111611.0245875United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN111710.1753United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN111810.738425United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN111910.2123875United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11209.763375United StatesUtah41.48524-112.0556
Helianthus annuusANN_33ANN112312.3023125United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11249.973475United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN112911.457075United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN113012.5434375United StatesUtah40.77115-112.15004
Helianthus annuusANN_34ANN113313.03935United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN113511.0261625United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN113610.51775United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN113712.5177United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11389.6964625United StatesUtah40.69149-112.26423
Helianthus annuusANN_35ANN114313.1405625United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114411.9766United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN114513.136375United StatesUtah40.51274-109.51947
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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