Details for Phenotype: Seed area (ID: 67)

Phenotype ID:
67
Name:
Seed area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm2
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Area of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN108010.8078625United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN108411.60175United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN108511.1808125United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10869.8723United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10899.426275United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN109012.20315United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN109110.502975United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10928.991875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN109310.0911United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN109411.15145United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10959.919125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10968.87755United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN109711.0009375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10989.2921875United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN110112.967225United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN110312.505United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11048.665975United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11058.793675United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN110613.8209125United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11079.6726875United StatesUtah40.1781-111.65071
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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