Details for Phenotype: Seed perimeter (ID: 66)

Phenotype ID:
66
Name:
Seed perimeter
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Perimeter of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_19ANN098615.4108375United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN098714.153675United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN098813.17095United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_20ANN099113.4878United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN099212.365United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN099612.6901625United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN099713.2253125United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN099814.074175United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN099913.7429125United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN100012.8316875United StatesColorado38.44366-107.62928
Helianthus annuusANN_21ANN100114.3052875United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN100215.6408125United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN100313.926975United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN100712.810125United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN100813.4975875United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN100914.14325United StatesColorado38.91004-108.3738
Helianthus annuusANN_22ANN101114.74195United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN101214.6122875United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN101315.0639125United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN101414.8659375United StatesColorado39.00672-108.46384
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.