Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_34ANN11310.312681218United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11330.306030797United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11340.308462321United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11350.317246036United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11360.321410789United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11370.311762692United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11380.319596721United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11390.323799955United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11400.31570738United StatesUtah40.69149-112.26423
Helianthus annuusANN_35ANN11410.318112316United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11420.312860177United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11430.324594064United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11440.323767198United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11450.317370509United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11460.314267482United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11470.318668325United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11480.32184356United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11490.318047146United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11500.325738697United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN11510.315760206United StatesWyoming41.77426-107.45885
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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