Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_32ANN11110.321042419United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11120.317780422United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11130.312542397United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11140.314061102United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11150.313713416United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11160.32272756United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11170.319802559United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11180.319069297United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11190.311367794United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11200.323530179United StatesUtah41.48524-112.0556
Helianthus annuusANN_33ANN11210.315070124United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11220.312672448United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11230.314815021United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11240.326215477United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11250.330478786United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11260.314633869United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11270.314506682United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11280.315363849United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11290.319029694United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11300.318391661United StatesUtah40.77115-112.15004
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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