Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN13170.481043667United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13180.457223837United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13190.456584454United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN13210.436826466United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13220.452804987United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13230.449104257United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13240.456297427United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13250.446533039United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13260.424375204United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13270.462641474United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13280.457025452United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13290.443256457United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13300.47000665United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN13310.452562947United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13320.46326275United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13330.480628056United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13340.450459497United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13360.467999164United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13370.468300563United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13380.453635974United StatesTexas29.11355-97.39837
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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