Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_54ANN13390.459419458United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13400.444584466United StatesTexas29.11355-97.39837
Helianthus annuusANN_55ANN13410.47160075United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13420.468053509United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13430.465924718United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13440.473351616United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13450.456374739United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13460.467756098United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13470.455990696United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13480.456028966United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13490.46420721United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13500.471891623United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN13510.454557399United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13520.468189833United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13530.442637733United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13540.466159461United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13550.60409577United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13560.47187793United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13570.450310092United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13580.444103589United StatesTexas28.08852-97.06011
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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