Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_50ANN12970.440642473United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12980.469689423United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12990.461811744United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13000.456870446United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13010.471940259United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13020.494989152United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13030.459701044United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13040.455203631United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13050.439503411United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13060.437768898United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13070.452446441United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13080.591944972United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13090.444586342United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13100.429265346United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13110.449219265United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13120.453924246United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13130.478902105United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13140.445955086United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13150.464895661United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13160.42786224United StatesTexas31.13312-104.02012
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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