Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_48ANN12740.438700755United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12750.473349724United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12760.44248037United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12770.465968439United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12780.42954611United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12790.458060339United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12800.450708639United StatesArizona31.5081-111.01274
Helianthus annuusANN_49ANN12810.454045438United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12830.458630429United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12840.425971324United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12850.467505334United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12860.465619345United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12880.43286549United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12890.431031311United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12900.45014821United StatesArizona31.43996-110.10544
Helianthus annuusANN_50ANN12910.442969358United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12920.432636065United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12930.437321915United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12940.453287117United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12960.44920555United StatesNew Mexico32.17943-108.38541
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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