Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_46ANN12540.466362845United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12550.443424231United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12560.457693989United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12570.449820905United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12580.462146411United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12590.450585504United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12600.451478845United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_47ANN12610.462389884United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12620.465024641United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12630.461054035United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12640.471983677United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12650.439072986United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12660.459647685United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12670.433212975United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12680.454262091United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12690.443233811United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12700.454841481United StatesArizona32.73158-111.53769
Helianthus annuusANN_48ANN12710.496541494United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12720.499542962United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12730.460709591United StatesArizona31.5081-111.01274
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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