Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_58ANN1379169.216United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN1380182.471United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN1381185.836United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1382170.685United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1383178.821United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1384190.804United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1385187.904United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1386190.901United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1387203.308United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1388173.869United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1389188.686United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN1390189.679United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN1391177.515United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1392163.708United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1393182.577United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1394193.396United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1395180.503United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1396186.034United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1397191.855United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1398182.796United StatesTexas27.28522-97.66729
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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