Details for Phenotype: Leaf shape index external II (ID: 44)

Phenotype ID:
44
Name:
Leaf shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_07ANN08641.5504United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08651.9204United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08661.71United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08671.6883United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08681.7783United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08692.3932United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08701.4638United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_08ANN08711.6026United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08721.9655United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08732.2166United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08742.8737United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08752.032United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08761.3953United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08771.565United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08782.2826United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08791.7168United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08802.164United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_09ANN08812.0United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08821.7582United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08832.381United StatesCalifornia37.43321-118.40646
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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