Details for Phenotype: Leaf shape index external II (ID: 44)

Phenotype ID:
44
Name:
Leaf shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_05ANN08431.743United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08441.5816United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08451.9739United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08461.6266United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08471.6605United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08481.9484United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08491.2537United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08501.7376United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_06ANN08511.9464United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08522.1855United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08531.6521United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08541.6583United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08551.4962United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08561.5437United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08572.3502United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08581.7708United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08591.4564United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08601.8333United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_07ANN08621.5265United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08631.2844United StatesCalifornia38.7892-119.9363
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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