Details for Phenotype: Leaf shape index external II (ID: 44)

Phenotype ID:
44
Name:
Leaf shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_09ANN08841.9652United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08852.4337United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08861.5951United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08872.0233United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08882.6189United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08892.2824United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08902.1065United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_10ANN08912.0379United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08921.5269United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08932.1262United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08941.6957United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08952.2304United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08962.2016United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08972.0904United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08982.4892United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08992.1408United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN09001.6452United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_11ANN09011.6574United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09021.2564United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09031.3769United StatesArizona35.19566-114.06666
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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