Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_07ANN08644.90648977United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08654.163693556United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08664.170717682United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08675.631786109United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08685.572954763United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08695.065624533United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08704.275389752United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_08ANN08715.281965157United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08724.497063388United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08734.549603546United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08745.004479981United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08753.875290945United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08764.39455184United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08775.439969358United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08784.370301038United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08796.554505349United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08804.036865688United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_09ANN08823.602340902United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08833.872937271United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08844.026954271United StatesCalifornia37.43321-118.40646
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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