Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_09ANN08854.89760508United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08864.38478013United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08873.387225614United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08885.101242999United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08894.494466895United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08904.11281241United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_10ANN08914.633042246United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08924.452369501United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08934.374912259United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08943.925484403United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08952.217228969United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08964.446692457United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08973.902054968United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08984.409875497United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08993.952671858United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN09003.743742341United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_11ANN09018.080961547United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09025.363581324United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09036.189387428United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09047.554832256United StatesArizona35.19566-114.06666
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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