Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_05ANN08445.051176466United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08455.417406425United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08465.421280132United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08474.546926788United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08483.861378246United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08494.779603868United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08505.116765111United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_06ANN08516.372426963United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08526.934962475United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08535.94307619United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08546.662691232United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08555.821034127United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08565.062134057United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08576.30417047United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08586.41171624United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08595.984841331United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08606.517679843United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_07ANN08615.136948069United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08624.645693338United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08636.116681224United StatesCalifornia38.7892-119.9363
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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