Details for Phenotype: Ligule length (ID: 17)

Phenotype ID:
17
Name:
Ligule length
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Inflorescence traits
Sub-Category:
Ligules
Type:
Quantitative
Ontology:
ligule length
Unit:
cm
#Samples:
570
#Populations:
62
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length of individual ligules
Phenotype Scoring
Average of three ligules length measurements performed on each of the first three inflorescences produced by each plant. Inflorescences were collected in the field, and front and back digital pictures were taken in the lab using a setup that provided even illumination. A size and colour standard was included in each picture. Measuements were taken using the Fiji software (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (62 Populations with 570 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_03ANN08235.276384879United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08244.857078879United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08255.483199357United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08265.214541733United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08273.67464695United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08284.340094999United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08294.415557752United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_04ANN08315.026499585United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08324.488402954United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08335.280220064United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08344.441767053United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08354.152074983United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08364.580036522United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08376.077587386United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08385.862641502United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08396.523984484United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08405.261030628United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_05ANN08416.44356456United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08425.379743732United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08435.695637694United StatesCalifornia33.69278-116.18411
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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