Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_15ARG0150227.988United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_16ARG0151239.2United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0152216.59United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0153268.106United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0154194.467United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0155257.259United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0156219.224United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0157224.597United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0158240.345United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0159208.894United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_16ARG0160248.714United StatesTexas27.68602-97.17672
Helianthus argophyllusARG_17ARG0161264.061United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0162234.779United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0163231.766United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0164211.852United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0166210.382United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0167220.578United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0168195.697United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0169222.703United StatesTexas27.61823-97.21178
Helianthus argophyllusARG_17ARG0170222.503United StatesTexas27.61823-97.21178
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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