Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_13ARG0130211.902United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_14ARG0131234.843United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0132200.102United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0133250.234United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0134248.893United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0135224.259United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0136219.544United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0137222.206United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0138220.498United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0139208.474United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_14ARG0140219.599United StatesTexas27.8469-97.04873
Helianthus argophyllusARG_15ARG0141256.007United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0142203.812United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0143198.167United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0144222.969United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0145209.436United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0146203.001United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0147201.125United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0148207.579United StatesTexas27.83481-97.08834
Helianthus argophyllusARG_15ARG0149201.967United StatesTexas27.83481-97.08834
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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