Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_18ARG0171204.736United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0172199.176United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0173222.514United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0174209.774United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0175217.809United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0176212.46United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0177196.87United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0179216.352United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_18ARG0180195.938United StatesTexas27.47822-97.28085
Helianthus argophyllusARG_19ARG0181205.496United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0182254.45United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0183195.23United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0184205.679United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0185229.164United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0186190.08United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0187231.872United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0188191.565United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0189249.974United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_19ARG0190245.576United StatesTexas27.57942-97.2215
Helianthus argophyllusARG_20ARG0191200.869United StatesTexas27.6611-97.31138
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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