Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_11ARG0110193.666United StatesTexas27.99705-97.07636
Helianthus argophyllusARG_12ARG0111205.997United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0112204.79United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0113234.931United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0114202.596United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0115215.294United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0116249.097United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0117234.91United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0118227.294United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0119230.792United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_12ARG0120231.58United StatesTexas27.93269-97.12295
Helianthus argophyllusARG_13ARG0121206.572United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0122196.242United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0123196.441United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0124213.9United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0125181.653United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0126204.341United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0127203.553United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0128210.431United StatesTexas27.83272-97.04939
Helianthus argophyllusARG_13ARG0129187.357United StatesTexas27.83272-97.04939
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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