Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_09ARG0086237.887United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_09ARG0087214.274United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_09ARG0088224.716United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_09ARG0089219.872United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_09ARG0090223.186United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_10ARG0091206.787United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0092189.345United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0093235.294United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0094224.429United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0095245.353United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0096257.878United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0097213.34United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0099245.525United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_10ARG0100220.981United StatesTexas28.10813-97.02884
Helianthus argophyllusARG_11ARG0103238.283United StatesTexas27.99705-97.07636
Helianthus argophyllusARG_11ARG0104180.696United StatesTexas27.99705-97.07636
Helianthus argophyllusARG_11ARG0105227.217United StatesTexas27.99705-97.07636
Helianthus argophyllusARG_11ARG0106147.231United StatesTexas27.99705-97.07636
Helianthus argophyllusARG_11ARG0108205.936United StatesTexas27.99705-97.07636
Helianthus argophyllusARG_11ARG0109226.108United StatesTexas27.99705-97.07636
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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