Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_07ARG0065219.741United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0066224.412United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0067211.32United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0068143.868United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0069230.679United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0070241.75United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_08ARG0071207.976United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0072207.131United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0073209.328United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0074197.547United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0075231.934United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0076252.231United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0077207.436United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0078239.01United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0079203.951United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_08ARG0080200.187United StatesTexas28.73672-97.03155
Helianthus argophyllusARG_09ARG0081194.226United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_09ARG0082225.054United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_09ARG0084233.822United StatesTexas28.18143-96.9948
Helianthus argophyllusARG_09ARG0085224.617United StatesTexas28.18143-96.9948
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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