Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_05ARG0044201.588United StatesTexas29.45132-97.6954
Helianthus argophyllusARG_05ARG0045230.032United StatesTexas29.45132-97.6954
Helianthus argophyllusARG_05ARG0046209.865United StatesTexas29.45132-97.6954
Helianthus argophyllusARG_05ARG0047210.237United StatesTexas29.45132-97.6954
Helianthus argophyllusARG_05ARG0048220.158United StatesTexas29.45132-97.6954
Helianthus argophyllusARG_05ARG0049240.369United StatesTexas29.45132-97.6954
Helianthus argophyllusARG_05ARG0050233.431United StatesTexas29.45132-97.6954
Helianthus argophyllusARG_06ARG0051209.037United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0052212.045United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0053225.302United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0054216.684United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0055198.159United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0056250.471United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0057211.739United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0058215.42United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_06ARG0059202.243United StatesTexas29.27191-97.66967
Helianthus argophyllusARG_07ARG0061208.239United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0062218.034United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0063224.001United StatesTexas28.70013-97.38772
Helianthus argophyllusARG_07ARG0064233.493United StatesTexas28.70013-97.38772
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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