Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_26ARG0255212.826United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_26ARG0256228.769United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_26ARG0257218.524United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_26ARG0258206.013United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_26ARG0260222.236United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_27ARG0261244.511United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0262220.545United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0263237.522United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0264227.013United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0265230.252United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0266236.168United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0267217.868United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0268217.86United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0269224.968United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_27ARG0270206.93United StatesTexas27.14245-98.14997
Helianthus argophyllusARG_28ARG0271218.693United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0272221.965United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0273198.806United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0274213.321United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0275236.082United StatesTexas27.00215-98.13579
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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