Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_28ARG0276217.984United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0277212.581United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0278247.471United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0279218.936United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_28ARG0280193.341United StatesTexas27.00215-98.13579
Helianthus argophyllusARG_29ARG0281220.087United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0282234.863United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0283235.056United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0284227.515United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0285234.62United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0287233.521United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0288259.859United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0289233.906United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_29ARG0290230.467United StatesTexas27.10014-98.14704
Helianthus argophyllusARG_30ARG0291222.549United StatesTexas27.25741-97.94589
Helianthus argophyllusARG_30ARG0292217.239United StatesTexas27.25741-97.94589
Helianthus argophyllusARG_30ARG0293246.759United StatesTexas27.25741-97.94589
Helianthus argophyllusARG_30ARG0294255.171United StatesTexas27.25741-97.94589
Helianthus argophyllusARG_30ARG0295232.452United StatesTexas27.25741-97.94589
Helianthus argophyllusARG_30ARG0296253.297United StatesTexas27.25741-97.94589
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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