Details for Phenotype: Total RGB (ID: 113)

Phenotype ID:
113
Name:
Total RGB
Species:
Helianthus argophyllus
Species NCBI-ID:
73275
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
284
#Populations:
30
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (30 Populations with 284 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus argophyllusARG_24ARG0233222.527United StatesTexas26.92402-97.79218
Helianthus argophyllusARG_24ARG0234248.643United StatesTexas26.92402-97.79218
Helianthus argophyllusARG_24ARG0235231.983United StatesTexas26.92402-97.79218
Helianthus argophyllusARG_24ARG0236234.767United StatesTexas26.92402-97.79218
Helianthus argophyllusARG_24ARG0238203.127United StatesTexas26.92402-97.79218
Helianthus argophyllusARG_24ARG0240218.537United StatesTexas26.92402-97.79218
Helianthus argophyllusARG_25ARG0241202.338United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0242222.75United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0243249.985United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0244251.975United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0245227.856United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0246247.679United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0247237.681United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0248248.513United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0249238.37United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_25ARG0250242.61United StatesTexas27.15959-97.79411
Helianthus argophyllusARG_26ARG0251242.932United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_26ARG0252242.407United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_26ARG0253231.089United StatesTexas27.27342-97.80311
Helianthus argophyllusARG_26ARG0254215.937United StatesTexas27.27342-97.80311
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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