Details for Phenotype: Seed shape index internal (ID: 85)

Phenotype ID:
85
Name:
Seed shape index internal
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the internal ellipse's height to its width
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_47ANN12631.758725United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12642.00325United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12651.6687625United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12661.79105United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12671.606875United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12681.6465United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12691.8507United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12701.7547875United StatesArizona32.73158-111.53769
Helianthus annuusANN_50ANN12911.850575United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12921.929425United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12941.714675United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13001.89125United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13021.8044United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13111.8911United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13141.7933375United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13152.0440875United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13161.5713125United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13171.8933625United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13181.7449125United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13191.6799625United StatesTexas31.13312-104.02012
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.