Details for Phenotype: Seed distal eccentricity (ID: 84)

Phenotype ID:
84
Name:
Seed distal eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the distance between the top of the ellipse and the bottom of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_22ANN10150.8859625United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10160.8449125United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10170.87084United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10180.8791875United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10190.884125United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10200.8475United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN10210.8665625United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10220.863975United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10230.869366667United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10240.8162375United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10250.853975United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10260.8313625United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10290.8504625United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10300.8751875United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN10310.86665United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10320.8716United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10330.8815United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10340.857425United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10350.862975United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10360.854175United StatesNevada39.48892-119.99511
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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