Details for Phenotype: Seed distal eccentricity (ID: 84)

Phenotype ID:
84
Name:
Seed distal eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the distance between the top of the ellipse and the bottom of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10800.8717875United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10840.87655United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10850.8285375United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10860.864625United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10890.796825United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10900.8424United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10910.813575United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10920.8679375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10930.85005United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10940.860225United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10950.8744125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10960.775825United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10970.8079625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10980.8796375United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11010.8345United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11030.852025United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11040.8465125United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11050.8732625United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11060.8801625United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11070.851525United StatesUtah40.1781-111.65071
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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