Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_05ANN08480.3361875United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_06ANN08510.3526United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08520.4101United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08530.3428125United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08540.357075United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08550.357725United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08560.3427375United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08570.3738375United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08580.3637625United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08590.339175United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08600.33245United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_07ANN08610.392875United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08620.398585714United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08630.384825United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08640.3570125United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08650.3977125United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08660.37635United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08670.36735United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08680.3550625United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08690.3706United StatesCalifornia38.7892-119.9363
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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