Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_03ANN08250.3844375United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08260.3503United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08270.348225United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08280.3708125United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_04ANN08310.394725United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08320.393675United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08330.3648625United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08340.3903625United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08350.351525United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08360.3390375United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08370.3611375United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08390.3778United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08400.3554United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_05ANN08410.371075United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08420.3384125United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08430.3658United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08440.35485United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08450.3546125United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08460.3364375United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08470.351475United StatesCalifornia33.69278-116.18411
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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