Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_59ANN13850.3923875United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13860.428725United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13870.370675United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13880.3533125United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13890.3708375United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13900.3693875United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN13910.3762625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13920.3712125United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13930.3871875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13940.3898375United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13950.3480625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13960.3777375United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13970.3663875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13980.36595United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13990.38295United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN14000.3703United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN14010.4101375United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14020.380025United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14030.335875United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14040.3592875United StatesTexas27.77652-97.66801
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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