Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_01ANN08010.387275United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08020.351825United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08040.370766667United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08050.4196625United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08060.387775United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08080.3609875United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08090.343975United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08100.3437375United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_02ANN08110.3808625United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08120.3325United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08140.3445375United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08150.3745375United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08160.371525United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08170.348925United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08180.4089375United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08190.34035United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_03ANN08210.421525United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08220.35485United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08230.377225United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08240.3674375United StatesCalifornia36.24542-120.31654
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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