Details for Phenotype: Seed shape index external II (ID: 75)

Phenotype ID:
75
Name:
Seed shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_03ANN08251.68655United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08261.9042375United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08271.7226125United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08281.752475United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_04ANN08312.2788125United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08321.8862125United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08331.8430375United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08341.6142875United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08352.247125United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08362.1385875United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08371.853225United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08391.81215United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08401.808475United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_05ANN08412.069075United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08421.6313375United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08431.8983United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08441.9512125United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08451.999725United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08461.637625United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08471.7028125United StatesCalifornia33.69278-116.18411
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.