Details for Phenotype: Seed HW ratio (ID: 73)

Phenotype ID:
73
Name:
Seed HW ratio
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Ratio between curved length and maximum seed width
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_57ANN13652.009378034United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13661.834738461United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13671.881222033United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13681.968489524United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13692.192437484United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13701.752273606United StatesTexas27.63854-97.24526
Helianthus annuusANN_58ANN13711.531946544United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13721.658242156United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13731.967955602United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13741.936975364United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13752.176884861United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13761.934972425United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13771.935000881United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13781.58195827United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13791.607517104United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13801.845872563United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN13811.859800843United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13821.865677849United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13831.897620217United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13841.734865109United StatesTexas26.50251-97.77181
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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