Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_13ANN09292.338925United StatesArizona34.75056-112.01697
Helianthus annuusANN_14ANN09312.3376125United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09322.5677875United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09332.714625United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09342.7014125United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09392.270125United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09402.5082625United StatesArizona36.1086-111.24184
Helianthus annuusANN_15ANN09432.8522125United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09443.110175United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09473.42635United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09483.0599125United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09493.3641625United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09503.530875United StatesArizona35.03852-110.7351
Helianthus annuusANN_16ANN09512.881325United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09522.91835United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09532.6313United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09542.370675United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09552.4857625United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09562.4884125United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09572.755625United StatesNew Mexico35.40041-108.23557
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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