Details for Phenotype: Seed width mid height (ID: 68)

Phenotype ID:
68
Name:
Seed width mid height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Width measured at 1/2 of the seed's length
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN12152.80855United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12172.6656875United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12182.64185United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12192.8641375United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12202.954257143United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN12212.8945375United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12222.9845125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12232.738425United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12242.727875United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12262.9553875United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12272.5730875United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12282.4950375United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12292.397125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12302.988475United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN12322.922325United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12332.3627375United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12352.5082625United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12362.33495United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12372.500325United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12382.31245United StatesTexas29.05186-99.01808
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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