Details for Phenotype: Seed area (ID: 67)

Phenotype ID:
67
Name:
Seed area
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed morphology trait
Unit:
cm2
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Area of an individual seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_22ANN101513.4464125United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN101611.9231625United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN101711.67658United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN101810.8626375United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10199.1115United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN102013.3437United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN102110.316525United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10229.589625United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN102312.94933333United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN102410.1823875United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN102512.8270125United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN102611.526825United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN102911.639475United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN103013.494925United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN103112.4494625United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN103214.7088625United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN103311.0534United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN103413.9047375United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN103510.383375United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN103614.8489125United StatesNevada39.48892-119.99511
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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