Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_01ANN08010.30883486United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08020.318654902United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08030.305985386United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08040.32107086United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08050.326984852United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08060.30120531United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08070.314898777United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08080.310787742United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08090.310379292United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_01ANN08100.316749683United StatesCalifornia38.56535-121.63765
Helianthus annuusANN_02ANN08110.307894142United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08120.319321845United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08130.313786811United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08140.312689283United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08150.325119603United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08160.307530625United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08170.31203179United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08180.307697974United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_02ANN08200.313016882United StatesCalifornia36.59499-120.75822
Helianthus annuusANN_03ANN08210.309593937United StatesCalifornia36.24542-120.31654
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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