Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_36ANN11520.460163092United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11530.467927091United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11540.443176081United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11550.473049747United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11560.464678187United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11570.457409374United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11590.516169304United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11600.490514079United StatesWyoming41.77426-107.45885
Helianthus annuusANN_37ANN11610.470140802United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11620.475380167United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11630.451740123United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11640.480637534United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11650.442419711United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11660.451890993United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11670.438259053United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11680.49003607United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11690.45366603United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11700.424740188United StatesColorado40.48679-105.09619
Helianthus annuusANN_38ANN11710.463293216United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11720.452473892United StatesKansas38.44118-98.63231
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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