Details for Phenotype: RGB proportion green (ID: 57)

Phenotype ID:
57
Name:
RGB proportion green
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of green in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_34ANN11310.482317014United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11330.442439827United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11340.454230555United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11350.464817904United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11360.485572525United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11370.450824857United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11380.474968565United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11390.470287667United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11400.45034283United StatesUtah40.69149-112.26423
Helianthus annuusANN_35ANN11410.47216209United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11420.45734629United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11430.474482648United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11440.468924584United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11450.465215501United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11460.469038352United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11470.487860653United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11480.470063688United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11490.468109269United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11500.483632036United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN11510.455392969United StatesWyoming41.77426-107.45885
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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