Details for Phenotype: Leaf shape index internal (ID: 54)

Phenotype ID:
54
Name:
Leaf shape index internal
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the internal ellipse's height to its width
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_05ANN08431.7434United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08441.4161United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08451.9032United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08461.6316United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08471.6667United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08481.9435United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08491.2531United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08501.75United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_06ANN08511.7241United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08522.1811United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08531.6516United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08541.6604United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08551.5032United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08561.4305United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08572.2907United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08581.3972United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08591.3846United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08601.8361United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_07ANN08621.0483United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08631.0933United StatesCalifornia38.7892-119.9363
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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