Details for Phenotype: Leaf shape index internal (ID: 54)

Phenotype ID:
54
Name:
Leaf shape index internal
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf shape
Type:
Quantitative
Ontology:
leaf shape
Unit:
No unit available
#Samples:
599
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the internal ellipse's height to its width
Phenotype Scoring
The youngest, fully developed leaf from the primary stem was collected at anthesis and scanned on a flatbed scanner, at a resolution of 300 dpi. A size and colour standard was included in each picture. For morphometric measurements, colours were inverted in Adobe Photoshop to increase contrast. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); leaf boundaries were manually adjusted when necessary.

Population Map (64 Populations with 599 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_03ANN08221.4889United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08231.7405United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08241.9063United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08250.8884United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08261.8984United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08271.625United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08281.8571United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08291.2229United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08301.9167United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_04ANN08312.5085United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08321.7143United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08332.1029United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08352.5147United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08362.8197United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08373.1864United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08383.1803United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08392.2969United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08402.2763United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_05ANN08410.866United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08421.6065United StatesCalifornia33.69278-116.18411
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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